All Publications

Title/Link Publication Date Tags Link
“Enumeration of Ring“ Chain Tautomers Based on SMIRKS Rules Cheminformatics, Organic, Publication, Tautomers
2012 San Diego ACS presentation: Registration system of mcule: InChI is the key (video) Data Extraction, Data Management, Video
2018 InChI OER Notre Dame Poster InChI Overview, Poster https://www.inchi-trust.org/wp/wp-content/uploads/2018/08/2018BCCE_InChIOER_Poster_Final-1.ppt
A brief introduction to SMILES and InChI 05/05/16 Blogs, Cheminformatics, Classroom Material, InChI Overview, Organic, Video
A chemical kinetic mechanism for combustion and flame propagation of CH2F2/O2/N2 mixtures 29/12/21 Reactions
A database of chemical structures and identifiers used in the control of WADA Prohibited Substances Data Management, Database Applications, IUPAC Project, Safety
A possible extension to the RInChI as a means of providing machine readable process data 11/04/17 AI/ML, Publication, Reactions
A Short History of the InChI Project InChI Overview, Slide Deck, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/Day_1_Stephen_Heller-NIH-Zoom-3-22-21.pptx
Additive InChI-based optimal descriptors: QSPR modeling of fullerene C60 solubility in organic solvents 06/01/09 Cheminformatics, Publication, organic application
An Update on the Open Source InChI Project at Google Tech Talks (video) 29/10/07 InChI Overview, Video
Analysing a billion reactions with the RInChI 05/05/22 Publication, Reactions
Analysing a billion reactions with the RInChI 05/05/22 Cheminformatics, Data Extraction, Publication, Reactions
Application of InChI to curate, index, and query 3-D structures 28/04/05 Cheminformatics, Database Applications, Publication
Applications of the InChI in cheminformatics with the CDK and Bioclipse 13/03/13 Cheminformatics, Data Management, Publication, Software
Batch Chemical IDs Conversion in Spreadsheets 06/06/19 Data Management, Resolvers, Spreadsheet https://www.inchi-trust.org/wp/wp-content/uploads/2019/06/IDsBatchConverter.zip
Breu introducció a la digitalització de la informació química Data Management, Publication
Can an InChI for Nano Address the Need for a Simplified Representation of Complex Nanomaterials across Experimental and Nanoinformatics Studies? 05/12/20 Nanomaterials, Publication
Capturing mixture composition: an open machine-readable format for representing mixed substances 23/05/19 Mixtures (MInChI), Publication
CAPTURING MIXTURES ” BRINGING INFORMATICS TO THE WORLD OF PRACTICAL CHEMISTRY” Mixtures (MInChI), Slide Deck, Software, Video
Capturing Mixtures ” Bringing Informatics to the World of Practical Chemistry”, Recorded live December 19, 2019 19/12/19 Mixtures (MInChI), Video
CheMagic Virtual Molecular Model Kit Cheminformatics, Classroom Material, Molecular Editor
Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration 19/05/11 Cheminformatics, Data Management, Publication, Search
Chemical Identifier Programmatic Access Portal 10/04/18 Academic Material, Cheminformatics, Database Applications, InChI Applications, InChI Key, Miscellaneous, Python, Software
Chemistry Programming with Python – Convert a SMILE String to InChI Using ChemSpider (Tutorial) 04/10/19 Cheminformatics, Classroom Material, Python, Software https://www.inchi-trust.org/wp/wp-content/uploads/2020/01/Python-Programming-2-InChI-ChemSpider-1.pdf
Chemistry Programming with Python – Retrieving InChI From PubChem (Tutorial) 04/10/19 Cheminformatics, Classroom Material, Publication, Python, Software https://www.inchi-trust.org/wp/wp-content/uploads/2020/01/Python-Programming-InChI-PubChem.pdf
Chemistry Programming with Python – Web Scraping Wikipedia For Chemical Identifiers (Tutorial) 04/10/19 Cheminformatics, Classroom Material, Publication, Python, Software https://www.inchi-trust.org/wp/wp-content/uploads/2020/01/Python-Programming-3-InChI-Wikipedia.pdf
ChemNames2LCSS 29/11/20 Data Management, Safety, Spreadsheet
Chemotion/NFDI4Chem Stammtisch (09/24/21) MInChI – InChI for Mixtures 07/01/22 Mixtures (MInChI), Video
Comparative evaluation of open source software for mapping between metabolite identifiers in metabolic network reconstructions: application to Recon 2 27/01/14 Metabolomics
Consistency of systematic chemical identifiers within and between small-molecule databases 13/12/12 Cheminformatics, Data Management, Database Applications, InChI Applications, Publication, Software, Toolkits
Coordination InChI for inorganics: now with stereochemistry 18/10/20 Blogs, Cheminformatics, Organometallics, Software
Crowdsourced Evaluation of InChI-based Tautomer Identification 24/11/22 Cheminformatics, Tautomers https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/ACS_InChI_2022_Borodina.pdf
Current Status and Future Development in Relation to IUPAC Activities 01/11/13 InChI Overview, Publication
CVDHD: a cardiovascular disease herbal database for drug discovery and network pharmacology Data Management, Database Applications, Drug Discovery, Publication
Data Formats for Elementary Gas Phase Kinetics, Part 1: Unique Representations of Species at the Molecular Level InChI Extensions, Publication
Detection of IUPAC and IUPAC-like chemical names 01/07/08 Cheminformatics, Content type, InChI Applications, Publication, Resolvers, Search, Toolkits
Development of a Machine Accessible Kinetic Databank for Radical Polymerizations 20/12/19 Database Applications, IUPAC Project, Polymer
Enhanced recognition and encoding of stereoconfiguration by InChI tools 12/02/20 IUPAC Project, Stereochemistry
Enhanced recognition and encoding of stereoconfiguration by InChI tools 09/09/19 IUPAC Project, InChI Development, InChI Extensions, Stereochemistry
Enhancement of the chemical semantic web through the use of InChI identifiers 18/04/05 InChI Applications, Publication, Semantic Web
Evaluated Kinetic Data for Atmospheric Chemistry 01/03/14 Data Extraction, Data Management, Database Applications, IUPAC Project, Reactions, toxicology
Experimental and Chemoinformatics Study of Tautomerism in a Database of Commercially Available Screening Samples Cheminformatics, Organic, Publication, Tautomers
Failures of fractional crystallization: ordered co‐crystals of isomers and near isomers Publication, Spreadsheet, Stereochemistry, organic application
Finalization of InChI standards for major chemistry areas, including organometallics and tautomers 19/11/21 IUPAC Project, InChI Development, Organometallics, Stereochemistry, Tautomers
Graphical Representation Standards for Chemical Reaction Diagrams 19/12/17 IUPAC Project, Reactions
Hack-a-Mol Cheminformatics, Classroom Material, Molecular Editor https://www.fireanatomy.com/inchi-trust/wp-content/uploads/2023/10/hackamolworkings.pdf
Handling of Inorganic compounds for InChI V2 01/03/13 IUPAC Project, InChI Development, Organometallics
How can the International Chemical Identifier (InChI) be extended to non-trivial chemicals? 23/08/12 Database Applications, InChI Overview, Slide Deck
How Many Miles Have We Gone, InChI by InChI? 01/09/12 InChI Applications, InChI Overview, Publication, Search
Identifier conversion on an Excel spreadsheet Spreadsheet https://www.inchi-trust.org/wp/wp-content/uploads/2018/07/ExcelResolver.xlsx
Identifying International Chemical Identifier (InChI) Enhancements – QR Codes and Industry Applications 16/12/16 IUPAC Project, InChI Development, Publication, QR Codes
Implementation of InChI for chemically modified large biomolecules 01/01/14 IUPAC Project, Large Molecules, Publication
Implementation of InChI for chemically modified large biomolecules 01/11/13 IUPAC Project, Large Molecules
InChI – the worldwide chemical structure identifier standard InChI Overview, Publication
InChI and the Islands (video) Content type, Video
InChI As a Research Data Management Tool Data Management, Publication
InChI extension for mixture composition 01/07/16 IUPAC Project, InChI Development, Mixtures (MInChI)
InChI extension for nanomaterials 05/12/23 IUPAC Project, InChI Development, InChI Extensions, Nanomaterials
InChI for inorganics 10/09/19 Blogs, Cheminformatics, InChI Development, InChI Overview, Organometallics
InChI for Nanomaterials 22/03/21 Nanomaterials, Slide Deck, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/12/Day_1_Iseult_Lynch_-_NInChI_presetnation-22_March_2021-2.pptx
InChI in the wild: an assessment of InChIKey searching in Google 11/02/13 InChI Applications, InChI Key, Publication, Resolvers, Search
InChI Infographic InChI Overview, Poster https://www.inchi-trust.org/wp/wp-content/uploads/2018/11/HR_A55856_InChi-trust_infographic.pdf
InchI Isotopologue and Isotopomer Proposal 30/09/19 Cheminformatics, InChI Development, InChI Overview, Isotopologues, Poster, Slide Deck
InChI Markush and Variability 22/03/21 Markush, Organic https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/Day_1_Markush_and_variability_JMG.pdf
InChI OER poster presented at ACS CERM Jun 2019 Poster, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2019/06/2019CERM_InChIOER_Poster.ppt
InChI Open Education Resource 29/10/18 Publication
InChI Requirements for Representation of Markush Structures 01/03/10 IUPAC Project, Markush
InChI Requirements for Representation of Organometallic and Coordination Compound Structures 01/11/10 IUPAC Project, InChI Development, Organometallics
InChI Requirements for Representation of Organometallic and Coordination Compound Structures 01/11/10 IUPAC Project, Inorganic
InChI Requirements for Representation of Polymers 01/03/10 IUPAC Project, InChI Development, Polymer
InChI Student Worksheet (Undergraduate) Classroom Material, InChI Overview, Organic https://www.inchi-trust.org/wp/wp-content/uploads/2019/03/Inchi-worksheets-and-answers.doc
InChI Trust Web Demo 14/10/23 Cheminformatics, Molecular Editor
InChI, the IUPAC International Chemical Identifier 13/05/15 InChI Applications, InChI Overview, Publication
InChI-based optimal descriptors: QSAR analysis of fullerene[C60]-based HIV-1 PR inhibitors by correlation balance Cheminformatics, Drug Design, Publication
InChI-Trust YouTube Channel InChI Overview, Video
InChI: a user’s perspective InChI Overview, Publication
InChI: connecting and navigating chemistry 13/12/12 Data Management, Database Applications, Publication, Search, Semantic Web
InChI: Measuring the Molecules 16/07/20 InChI Applications, InChI Overview, Video
InChIKey collision resistance: an experimental testing 20/12/12 InChI Key, Publication
InChILayersExplorer – A Spreadsheet to teach and learn the structure of an InChI 27/07/24 Cheminformatics, Classroom Material, InChI Overview, Spreadsheet https://www.fireanatomy.com/inchi-trust/wp-content/uploads/2019/07/InChILayersExplorer_polymer_isotopologues.xlsx
InChIs and Registry Numbers InChI Overview, Search
InChI’ng forward: Community Engagement in IUPAC’s Digital Chemical identifier 01/01/18 IUPAC Project, InChI Applications, Publication
International Chemical Identifier for Reactions (RInChI) 22/03/13 Content type, Publication
International chemical identifier for reactions (RInChI) Publication, Reactions
International chemical identifier for reactions (RInChI) 24/10/13 Publication, Reactions
International Chemical Identifier for Reactions (RInChI) 21/03/18 Reactions, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/StructurePendium.pdf
International chemical identifier for reactions (RInChI) Version 1.00 Technical Manual 14/03/17 Cheminformatics, InChI Development, InChI Extensions, Reactions
Introduction to the International Chemical Identifier (for Organic Chemistry Undergraduates) 22/08/19 Classroom Material, Organic https://www.inchi-trust.org/wp/wp-content/uploads/2019/08/InChI_UndergradIntroductionWalkerAug2019.doc
isoenum – a python package to enumerate isotopically resolved InChI Isotopologues, Metabolomics, Software
Isotope Enumerator Web GUI (isoenum-webgui) 14/08/19 Isotopologues, Metabolomics, Software
Isotopomer and InChI Student Worksheet 11/09/24 Cheminformatics, Classroom Material, Isotopologues https://www.fireanatomy.com/inchi-trust/wp-content/uploads/2024/09/Isotopomer_and_inchi_student_worksheet_final-1.docx, https://www.fireanatomy.com/inchi-trust/wp-content/uploads/2024/09/Isotopomer_and_inchi_student_worksheet_with_answers_final-1.docx
IUPAC Name2PubChem Cheminformatics, Classroom Material, Semantic Web, Spreadsheet, Video
IUPAC and the InChI Trust Agree Upon Conditions for Collaboration InChI Development, Publication
IUPAC InChI (Video) at Google Tech Talks (2006) 02/11/06 InChI Development, InChI Overview, Video
IUPAC InChI/InChIKey Project Joins Microsoft BioIT Alliance Publication
IUPAC International Chemical Identifier (FairSharing.org) 15/02/19 InChI Development
IUPAC STANDARDS ONLINE 19/06/17 Video
Many InChIs and quite some feat 17/06/15 InChI Development, InChI Overview, Search
Matlab InChIKey Scripts Cheminformatics, Data Extraction, Data Management, Matlab
MInChI Specification Documentation (draft) Cheminformatics, Mixtures (MInChI)
MInChI Web Demo Cheminformatics, InChI Development, Mixtures (MInChI), Software
Mixtures as first class citizens in the realms of informatics 10/02/21 Cheminformatics, Mixtures (MInChI), Video
Mixtures InChI: A story of how stadards drive upstream products Cheminformatics, Mixtures (MInChI), Video
Mixtures: Informatics for formulations and consumer products 03/11/20 Cheminformatics, Mixtures (MInChI), Video
MMsDusty: an Alternative InChI-Based Tool to Minimize Chemical Redundancy 16/07/13 Cheminformatics, Data Management, Database Applications, Publication, Software
MolView 03/12/15 Cheminformatics, Molecular Editor, Organic, Video
NCI CADD Tautomerizer Cheminformatics, IUPAC Project, Software, Tautomers
Nomenclature and Associated Terminology for Inorganic Nanoscale Particles 15/11/19 IUPAC Project, Nanomaterials
On InChI and Evaluating the Quality of Cross-reference Links 17/04/14 Cheminformatics, Data Management, Publication, Software
Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on 14/10/11 Cheminformatics, Data Management, FAIR Data, ODOSOS, Publication, Search, Software, Toolkits
Progress towards “Large Molecule” support with InChI 22/03/21 Cheminformatics, Large Molecules, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/12/Day_1_bolton_NIH_InChI_Workshop_2021Mar.pdf
Pub Chem Chemical Structure Sketcher 17/12/09 Cheminformatics, Classroom Material, Molecular Editor
PubChem chemical structure standardization 10/08/18 Cheminformatics, Content type, Data Extraction, Data Management, InChI Applications, InChI Key, Publication, Search, Software, Toolkits
PubChem: Advancing chemical information through InChI Cheminformatics, Data Extraction, Data Management, FAIR Data, InChI Applications, InChI Development, Miscellaneous, ODOSOS, Resolvers, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/ACS-CINF-InChI-Fall-2022-Bolton-1-1.pdf
QRInChI: InChI QR code generator Data Management, QR Codes
QSAR-modeling of toxicity of organometallic compounds by means of the balance of correlations for InChI-based optimal descriptors Cheminformatics, InChI Applications, Organometallics, Publication, Search, toxicology
QSPR modeling of octanol water partition coefficient of platinum complexes by InChI-based optimal descriptors 18/11/08 Cheminformatics, Publication
RDKit InChI Calculation with Jupyter Notebook 29/07/19 Cheminformatics, Classroom Material, Python, Software, Toolkits
Redesign of Handling of Tautomerism for InChI V2 01/08/12 Database Applications, IUPAC Project, InChI Development, Tautomers
Representation of chemical structures Cheminformatics, Publication
RInChI – What is next? 22/03/21 Reactions, Slide Deck, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/Day_1_Gerd_Blanke-2021-03-22_RInChI_what_is_next.pptx, https://cactus.nci.nih.gov/presentations/NIHInChI_2021-03/Day_1_Blanke_2021-03-22_RInChI_what_is_next.pdf
Seminal InChI Publications 11/01/16 InChI Overview, Publication
Simplified molecular input-line entry system and International Chemical Identifier in the QSAR analysis of styrylquinoline derivatives as HIV-1 integrase inhibitors Drug Discovery, Publication
Solving the Issues in Standardisation of Stereochemical Representations 21/11/17 Cheminformatics, Stereochemistry, Toolkits, Video
Standard InChI Defined 17/01/09 Academic Material, Cheminformatics, Content type
Status of the InChI algorithm and InChI trust 01/05/12 Academic Material, Cheminformatics, Content type, Publication
Status of the IUPAC InChI Chemical Structure Standard – Today and the Future. Poster, Mainz 2018 InChI Overview, Poster https://www.inchi-trust.org/wp/wp-content/uploads/2018/11/Mainz-poster-final-11-18.pdf
Tautomer Database: A Comprehensive Resource for Tautomerism Analyses 10/03/20 Data Management, Database Applications, Publication, Tautomers
Tautomer Identification and Tautomer Structure Generation Based on the InChI Code 29/06/10 Publication, Tautomers
Tautomerism in large databases Cheminformatics, Data Management, Publication, Tautomers
Tautomerism of Warfarin: Combined Chemoinformatics, Quantum Chemical, and NMR Investigation 16/10/15 Cheminformatics, Drug Design, Drug Discovery, Publication, Tautomers
Tautomers in InChI 22/03/21 Cheminformatics, Slide Deck, Tautomers, Video https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/Day_1_Nicklaus_Tautomerism_2021-03-21A.pdf
The Chemical Translation Servicea web-based tool to improve standardization of metabolomic report Database Applications, Metabolomics, Publication, Semantic Web, Toolkits
The Future of Machine Interpretation of Chemical Structures Content type, Publication
The InChI Code 12/04/20 InChI Overview, Publication
The InChI Team presented with the 2014 Chemical Structure Association (CSA) Trust Mike Lynch Award 01/01/14 Content type https://www.degruyter.com/downloadpdf/j/ci.2014.36.issue-5/ci-2014-0514/ci-2014-0514.pdf
The IUPAC International Chemical Identifier (InChI) 01/09/09 InChI Overview, Publication
The IUPAC International Chemical Identifier: InChl A New Standard for Molecular Informatics 01/09/09 InChI Overview, Publication https://www.degruyter.com/downloadpdf/j/ci.2006.28.issue-6/ci.2006.28.6.12/ci.2006.28.6.12.pdf
The RInChI Project 22/03/13 Reactions, Toolkits
The Semantic Chemical Web: GoogleInChI and other Mashups Search, Semantic Web
The Status of the InChI Project – 8/25/2011 InChI Overview, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2018/07/nci-8-11.pdf
The Status of the International Chemical Identifier standard-InChI 6/1/2014 InChI Overview, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2018/07/AMS-5-14.pdf
The Status of the IUPAC InChI Chemical Structure Standard – Today and the Future InChI Overview, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2018/07/sao-paulo-7-17.pdf
Toward a Comprehensive Treatment of Tautomerism in Chemoinformatics Including in InChI V2 23/03/20 Publication, Tautomers
Towards a Universal SMILES representation – A standard method to generate canonical SMILES based on the InChI 18/09/12 Cheminformatics, InChI Overview
UniChem: a unified chemical structure cross-referencing and identifier tracking system 14/01/13 Cheminformatics, Data Management, Database Applications, FAIR Data, Publication, Semantic Web
UniChem: extension of InChI-based compound mapping to salt, connectivity and stereochemistry layers Database Applications, InChI Extensions, Publication
Unraveling compound taxonomies in untargeted metabolomics through artificial intelligence AI/ML, Metabolomics, Scientific Applications
Use of the international chemical identifier for constructing QSPR-model of normal boiling points of acyclic carbonyl substances Cheminformatics, Publication
Using MolView.org to check your structures in ogranic chemistry 01/12/15 Classroom Material, Molecular Editor, Organic, Video
What on the Earth is InChI? – IUPAC 100 Stories InChI Overview, Video
Why is Isotopic Labeling Useful in Metabolomics? 24/06/19 Academic Material, Cheminformatics, Content type, Isotopologues, Slide Deck https://www.inchi-trust.org/wp/wp-content/uploads/2022/11/2019-06-24_Metabolomics_2019_workshop_intro_v3.pptx
WorldFAIR Chemistry – 2. Training Cookbook: Digital recipes for managing chemical data 01/11/22 Cheminformatics, FAIR Data, IUPAC Project
yaInChI: Modified InChI string scheme for line notation of chemical structures 02/04/12 InChI Applications, Publication